Parturition: Neelix and Paris food fight over Kes but then bringing up (alien) baby brings them back together again.
Persistence of Vision: The memories that haunt: Janeway faces and accusatory Mark, B'Elanna desires an amorous Chakotay (which we'll never see again), Kim misses the slightly dull Libby, and we all realize how difficult things are for Tuvok, who has lost the most. And Janeway wasn't crazy.
Tattoo: Oh, so that's how Chakotay got that thing on his face.
Cold Fire: Creepy Kes episode with creepy Ocampa guy. All around creepiness abounds, and Tuvok gets boiled.
Maneuvers: That b*tch Seska is back in all her glory, this time with the Kazon. Chakotay does a bad job of dealing with "his problem." Seska impregnates herself with Chakotay DNA. Uh oh!
Resistance: A planetside episode. B'Elanna and Tuvok are kidnapped, Janeway is mistaken for a dead daughter, and an old man dies.
Prototype: We find out that Janeway is always right when B'Elanna is taken hostage by a group of robots wanting to reproduce who fail to inform anyone that they are (a) at war and (b) killed all of their creators.